Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
176
DNase-seq
15
ChIP-seq
1
snATAC-seq
Assay category
177
DNA accessibility
15
DNA binding
Target of assay
transcription factor
12
histone
12
histone modification
6
broad histone mark
6
narrow histone mark
3
control
2
RNA binding protein
Date released
163
June, 2019
13
August, 2017
9
November, 2018
4
October, 2019
2
September, 2017
1
May, 2022
Available data
1818
bam
1644
bigWig
1076
tsv
874
bed narrowPeak
496
bigBed narrowPeak
298
fastq
238
tagAlign
213
bed broadPeak
192
bed bed3+
176
bigBed broadPeak
157
txt
64
xls
25
bed bedMethyl
25
bigBed bedMethyl
11
hic
10
bedpe bed3+
6
csv
5
bed bed3
1
bedpe
1
tagAlign bed3+
Organism
192
Homo sapiens
Biosample type
192
tissue
37
primary cell
19
in vitro differentiated cells
3
cell line
3
stem cell
Organ
68
kidney
36
limb
33
musculature of body
27
brain
27
heart
20
pancreas
18
ureter
5
blood vessel
5
vasculature
4
artery
4
liver
3
eye
2
adipose tissue
2
connective tissue
2
nerve
1
spleen
Project
192
AMP
Genome assembly (visualization)
191
GRCh38
176
hg19
Lab
192
AMP-T2D consortium
Audit category:
1
audit script error
1
inconsistent ontology term
Audit category:
4
missing controlled_by
target.investigated_as!
transcription factor
BIOSAMPLE
ASSAY
192 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
ChIP-seq
snATAC-seq
tissue
heart
18
muscle of arm
17
brain
14
islet of Langerhans
14
kidney
13
+ See 41 more…
See all biosamples
Download