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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
532
ChIP-seq
Assay category
532
DNA binding
Target of assay
533
histone modification
532
histone
286
narrow histone mark
246
broad histone mark
171
control
82
transcription factor
18
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
2
nucleotide modification
Date released
163
October, 2019
123
August, 2017
76
May, 2019
70
November, 2017
30
October, 2018
27
May, 2020
18
April, 2019
12
October, 2017
6
January, 2019
5
December, 2017
2
March, 2020
Available data
426
bigWig
424
bed narrowPeak
406
bam
258
bigBed narrowPeak
186
tagAlign
73
fastq
35
bed broadPeak
12
bed bed3+
1
tagAlign bed3+
Organism
526
Homo sapiens
Biosample type
532
tissue
235
primary cell
112
in vitro differentiated cells
38
cell line
2
stem cell
Organ
184
brain
73
pancreas
69
liver
heart
54
blood vessel
54
vasculature
49
limb
33
connective tissue
32
adipose tissue
25
musculature of body
24
nerve
20
artery
20
kidney
6
spleen
4
gonad
4
ovary
2
eye
1
lymph node
1
pituitary gland
Project
530
AMP
2
T1D
Genome assembly (visualization)
399
GRCh38
377
hg19
Lab
532
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
8
missing controlled_by
Audit category:
6
inconsistent control read length
1
inconsistent assembly
organ_slims!
heart
BIOSAMPLE
ASSAY
532 results
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Clear Filters
ChIP-seq
tissue
liver
64
islet of Langerhans
51
subcutaneous abdominal adipose tissue
31
tibial nerve
24
kidney
20
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