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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
533
ChIP-seq
Assay category
533
DNA binding
Target of assay
533
histone modification
532
histone
286
narrow histone mark
246
broad histone mark
173
control
83
transcription factor
19
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
2
nucleotide modification
Date released
168
October, 2019
124
August, 2017
89
May, 2019
70
November, 2017
April, 2019
30
October, 2018
27
May, 2020
12
October, 2017
6
January, 2019
5
December, 2017
2
March, 2020
Available data
427
bigWig
425
bed narrowPeak
407
bam
253
bigBed narrowPeak
186
tagAlign
74
fastq
35
bed broadPeak
12
bed bed3+
1
tagAlign bed3+
Organism
527
Homo sapiens
Biosample type
533
tissue
237
primary cell
112
in vitro differentiated cells
38
cell line
2
stem cell
Organ
184
brain
73
pancreas
70
liver
54
blood vessel
54
vasculature
49
limb
33
connective tissue
32
adipose tissue
25
musculature of body
24
nerve
20
artery
18
heart
6
spleen
4
gonad
4
ovary
2
eye
2
kidney
1
lymph node
1
pituitary gland
Project
531
AMP
2
T1D
Genome assembly (visualization)
400
GRCh38
378
hg19
Lab
533
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
8
missing controlled_by
Audit category:
6
inconsistent control read length
1
inconsistent assembly
month_released!
April, 2019
BIOSAMPLE
ASSAY
533 results
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Clear Filters
ChIP-seq
tissue
liver
65
islet of Langerhans
51
subcutaneous abdominal adipose tissue
31
tibial nerve
24
layer of hippocampus
20
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