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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
305
ChIP-seq
Assay category
305
DNA binding
Target of assay
585
histone modification
584
histone
305
narrow histone mark
279
broad histone mark
187
control
71
transcription factor
22
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
2
nucleotide modification
Date released
129
October, 2019
47
August, 2017
33
May, 2019
28
November, 2017
27
May, 2020
23
April, 2019
11
October, 2018
2
December, 2017
2
January, 2019
2
March, 2020
1
October, 2017
Available data
249
bed narrowPeak
249
bigWig
239
bam
109
tagAlign
107
bigBed narrowPeak
24
fastq
14
bed broadPeak
3
bed bed3+
1
tagAlign bed3+
Organism
303
Homo sapiens
Biosample type
305
tissue
92
primary cell
54
in vitro differentiated cells
18
cell line
1
stem cell
Organ
113
brain
44
liver
29
pancreas
23
heart
18
blood vessel
18
vasculature
15
limb
13
connective tissue
12
adipose tissue
10
kidney
9
musculature of body
8
nerve
6
artery
4
gonad
4
ovary
2
eye
2
spleen
1
lymph node
1
pituitary gland
Project
303
AMP
2
T1D
Genome assembly (visualization)
235
hg19
232
GRCh38
Lab
305
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
missing controlled_by
Audit category:
3
inconsistent control read length
audit.NOT_COMPLIANT.category!
missing controlled_by
BIOSAMPLE
ASSAY
305 results
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Clear Filters
ChIP-seq
tissue
liver
42
islet of Langerhans
34
subcutaneous abdominal adipose tissue
11
kidney
10
heart left ventricle
9
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