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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
298
ChIP-seq
Assay category
298
DNA binding
Target of assay
563
histone modification
562
histone
298
narrow histone mark
264
broad histone mark
158
control
74
transcription factor
12
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
2
nucleotide modification
Date released
129
October, 2019
50
August, 2017
33
May, 2019
28
November, 2017
27
May, 2020
23
April, 2019
October, 2018
2
December, 2017
2
January, 2019
2
March, 2020
2
October, 2017
Available data
242
bigWig
240
bed narrowPeak
232
bam
110
tagAlign
97
bigBed narrowPeak
23
fastq
15
bed broadPeak
6
bed bed3+
1
tagAlign bed3+
Organism
296
Homo sapiens
Biosample type
298
tissue
115
primary cell
55
in vitro differentiated cells
19
cell line
1
stem cell
Organ
114
brain
44
liver
23
heart
21
pancreas
18
blood vessel
18
vasculature
15
limb
13
connective tissue
12
adipose tissue
10
kidney
9
musculature of body
8
nerve
6
artery
4
gonad
4
ovary
2
eye
2
spleen
1
lymph node
1
pituitary gland
Project
296
AMP
2
T1D
Genome assembly (visualization)
228
hg19
225
GRCh38
Lab
298
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
4
missing controlled_by
Audit category:
2
inconsistent control read length
month_released!
October, 2018
BIOSAMPLE
ASSAY
298 results
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Clear Filters
ChIP-seq
tissue
liver
42
islet of Langerhans
37
subcutaneous abdominal adipose tissue
11
kidney
10
heart left ventricle
9
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