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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
297
ChIP-seq
Assay category
297
DNA binding
Target of assay
561
histone modification
560
histone
297
narrow histone mark
263
broad histone mark
163
control
72
transcription factor
18
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
2
nucleotide modification
Date released
129
October, 2019
38
August, 2017
33
May, 2019
28
November, 2017
27
May, 2020
23
April, 2019
11
October, 2018
2
December, 2017
2
January, 2019
2
March, 2020
2
October, 2017
Available data
251
bigWig
249
bed narrowPeak
242
bam
107
bigBed narrowPeak
107
tagAlign
27
fastq
14
bed broadPeak
6
bed bed3+
1
tagAlign bed3+
Organism
295
Homo sapiens
Biosample type
297
tissue
115
primary cell
55
in vitro differentiated cells
19
cell line
1
stem cell
Organ
114
brain
44
liver
32
pancreas
23
heart
18
blood vessel
18
vasculature
15
limb
13
connective tissue
adipose tissue
10
kidney
9
musculature of body
8
nerve
6
artery
4
gonad
4
ovary
2
eye
2
spleen
1
lymph node
1
pituitary gland
Project
295
AMP
2
T1D
Genome assembly (visualization)
237
hg19
235
GRCh38
Lab
297
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
4
missing controlled_by
Audit category:
3
inconsistent control read length
organ_slims!
adipose tissue
BIOSAMPLE
ASSAY
297 results
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Clear Filters
ChIP-seq
tissue
liver
42
islet of Langerhans
37
kidney
10
heart left ventricle
9
layer of hippocampus
8
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