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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
129
ATAC-seq
26
snATAC-seq
Assay category
155
DNA accessibility
149
Transcription
3
3D chromatin structure
Date released
70
August, 2021
38
May, 2022
13
February, 2023
11
May, 2023
10
April, 2020
8
January, 2021
4
March, 2019
1
October, 2017
Available data
102
bed narrowPeak
64
xls
21
bigWig
20
fastq
19
bam
2
bed broadPeak
Organism
154
Homo sapiens
Biosample type
155
tissue
105
primary cell
10
in vitro differentiated cells
Organ
81
kidney
44
pancreas
20
liver
10
lung
Project
124
AMP
21
T1D
10
LungMap
Genome assembly (visualization)
78
GRCh38
41
hg19
Lab
AMP-T2D consortium
81
Katalin Susztak, Upenn
39
Kyle Gaulton, UCSD
20
Karen Mohlke, UNC
10
Xin Sun, UCSD
2
Mark McCarthy, Oxford
1
Bing Ren, UCSD
1
Maike Sander, UCSD
1
Stephen Parker, UMich
assay_title!
ChIP-seq
lab.title!
AMP-T2D consortium
BIOSAMPLE
ASSAY
155 results
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ATAC-seq
snATAC-seq
tissue
kidney
75
6
islet of Langerhans
34
6
liver
20
lung
10
pancreas
4
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