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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
95
ATAC-seq
69
total RNA-seq
67
single cell RNA-seq
ChIP-seq
16
snATAC-seq
1
Hi-C
1
pCHi-C
Assay category
136
Transcription
111
DNA accessibility
1
3D chromatin structure
Date released
128
August, 2021
47
September, 2023
40
May, 2022
19
April, 2020
14
May, 2023
1
May, 2021
Available data
84
bed narrowPeak
64
xls
57
txt
20
bigWig
1
hic
Organism
248
Homo sapiens
Biosample type
295
primary cell
249
tissue
23
cell line
17
in vitro differentiated cells
2
stem cell
Organ
189
kidney
pancreas
40
liver
19
lung
1
thymus
Project
182
AMP
47
KPMP
19
LungMap
1
T1D
Genome assembly (visualization)
75
GRCh38
21
hg19
Lab
AMP-T2D consortium
142
Katalin Susztak, Upenn
47
KPMP
40
Karen Mohlke, UNC
19
Xin Sun, UCSD
1
Kyle Gaulton, UCSD
assay_title!
ChIP-seq
lab.title!
AMP-T2D consortium
organ_slims!
pancreas
BIOSAMPLE
ASSAY
249 results
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ATAC-seq
total RNA-seq
single cell RNA-seq
snATAC-seq
Hi-C
pCHi-C
tissue
kidney
75
49
58
6
1
liver
20
20
lung
9
10
thymus
1
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