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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ChIP-seq
22
total RNA-seq
16
ATAC-seq
4
DNase-seq
4
pCHi-C
2
RNA microarray
1
Hi-C
1
single cell RNA-seq
Assay category
23
Transcription
20
DNA accessibility
1
3D chromatin structure
Date released
545
February, 2021
229
August, 2021
163
June, 2019
143
May, 2020
120
July, 2018
108
August, 2017
95
February, 2023
77
July, 2019
66
May, 2022
47
October, 2019
47
September, 2023
40
May, 2021
40
November, 2019
38
March, 2020
25
February, 2020
19
April, 2020
16
November, 2018
15
May, 2023
8
January, 2021
8
October, 2017
6
April, 2018
5
March, 2019
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
Available data
15
bigWig
14
bam
10
tsv
6
bed narrowPeak
5
bigBed narrowPeak
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bedpe bed3+
1
hic
Organism
50
Homo sapiens
Biosample type
50
tissue
15
primary cell
10
in vitro differentiated cells
7
cell line
Organ
19
eye
10
limb
7
nerve
3
artery
3
blood vessel
3
heart
3
kidney
3
pancreas
3
vasculature
2
brain
1
adipose tissue
1
connective tissue
1
epithelium
1
liver
1
pituitary gland
1
skin of body
Project
50
AMP
Genome assembly (visualization)
16
hg19
14
GRCh38
Lab
50
AMP-T2D consortium
Audit category:
2
audit script error
assay_title!
ChIP-seq
BIOSAMPLE
ASSAY
50 results
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total RNA-seq
ATAC-seq
DNase-seq
pCHi-C
RNA microarray
Hi-C
single cell RNA-seq
tissue
islet of Langerhans
14
13
4
tibial nerve
4
1
2
heart
2
1
tibial artery
1
2
adipose tissue
1
brain
1
kidney
1
kidney interstitium
1
liver
1
renal glomerulus
1
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