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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ChIP-seq
38
ATAC-seq
7
total RNA-seq
6
single cell RNA-seq
DNase-seq
2
WGBS
1
Hi-C
1
pCHi-C
Assay category
38
DNA accessibility
13
Transcription
2
DNA methylation
1
3D chromatin structure
Date released
35
February, 2023
7
July, 2019
6
August, 2021
3
February, 2020
3
March, 2020
1
October, 2019
Available data
38
bed narrowPeak
14
tsv
9
bam
8
bigWig
1
bed bedMethyl
1
bedpe bed3+
1
bigBed bedMethyl
1
hic
Organism
55
Homo sapiens
Biosample type
60
cell line
55
tissue
7
primary cell
Organ
471
connective tissue
413
adipose tissue
381
pancreas
204
kidney
202
liver
163
heart
158
bone element
55
blood vessel
55
vasculature
51
eye
41
artery
29
brain
21
musculature of body
20
limb
20
lung
16
skeleton
15
epithelium
6
nerve
4
spleen
2
intestine
2
thymus
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
ovary
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
55
AMP
Genome assembly (visualization)
43
GRCh38
8
hg19
Lab
55
AMP-T2D consortium
assay_title!
ChIP-seq
DNase-seq
BIOSAMPLE
ASSAY
55 results
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ATAC-seq
total RNA-seq
single cell RNA-seq
WGBS
Hi-C
pCHi-C
tissue
coronary artery
36
1
aorta
1
4
2
1
1
thoracic aorta
1
2
ascending aorta
2
pulmonary artery
2
tibial artery
1
1
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