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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ChIP-seq
38
ATAC-seq
7
total RNA-seq
6
single cell RNA-seq
5
DNase-seq
2
WGBS
1
Hi-C
1
pCHi-C
Assay category
43
DNA accessibility
13
Transcription
2
DNA methylation
1
3D chromatin structure
Date released
35
February, 2023
7
July, 2019
6
August, 2021
3
February, 2020
3
June, 2019
3
March, 2020
3
October, 2019
Available data
43
bed narrowPeak
14
bam
14
tsv
13
bigWig
5
bed bed3+
5
bed broadPeak
5
bigBed broadPeak
5
bigBed narrowPeak
1
bed bedMethyl
1
bedpe bed3+
1
bigBed bedMethyl
1
hic
Organism
60
Homo sapiens
Biosample type
cell line
60
tissue
11
primary cell
Organ
473
connective tissue
415
adipose tissue
388
pancreas
272
kidney
206
liver
190
heart
158
bone element
60
blood vessel
60
vasculature
56
brain
56
limb
54
eye
53
musculature of body
45
artery
20
lung
18
ureter
16
skeleton
15
epithelium
8
nerve
5
spleen
2
intestine
2
thymus
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
ovary
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
60
AMP
Genome assembly (visualization)
48
GRCh38
13
hg19
Lab
60
AMP-T2D consortium
assay_title!
ChIP-seq
biosample_type!
cell line
BIOSAMPLE
ASSAY
60 results
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ATAC-seq
total RNA-seq
single cell RNA-seq
DNase-seq
WGBS
Hi-C
pCHi-C
tissue
coronary artery
36
1
2
aorta
1
4
2
1
1
tibial artery
1
1
2
ascending aorta
2
1
thoracic aorta
1
2
pulmonary artery
2
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