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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
pCHi-C
total RNA-seq
7
Hi-C
2
ATAC-seq
2
ChIP-seq
Assay category
7
3D chromatin structure
2
DNA accessibility
2
DNA binding
Target of assay
2
histone
2
histone modification
2
narrow histone mark
Date released
218
October, 2019
195
August, 2017
179
August, 2021
162
June, 2019
115
May, 2019
82
February, 2023
82
November, 2017
80
April, 2019
74
October, 2018
50
May, 2020
48
December, 2017
47
September, 2023
46
July, 2019
40
May, 2022
40
May, 2024
29
March, 2020
26
November, 2018
23
October, 2017
20
November, 2019
19
April, 2020
17
February, 2021
14
May, 2023
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
1
May, 2021
Available data
19
tsv
7
bedpe bed3+
7
hic
4
bigWig
2
bam
2
bed narrowPeak
Organism
29
Homo sapiens
Biosample type
29
tissue
3
stem cell
2
cell line
1
in vitro differentiated cells
1
primary cell
Organ
6
pancreas
5
heart
3
musculature of body
2
blood vessel
2
brain
2
intestine
2
liver
2
vasculature
1
adipose tissue
1
adrenal gland
1
connective tissue
1
esophagus
1
gonad
1
large intestine
1
lung
1
ovary
1
small intestine
1
spleen
1
thymus
Project
27
AMP
2
T1D
Genome assembly (visualization)
11
hg19
2
GRCh38
Lab
29
AMP-T2D consortium
Audit category:
inconsistent ontology term
assay_title!
total RNA-seq
audit.ERROR.category!
inconsistent ontology term
BIOSAMPLE
ASSAY
29 results
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Clear Filters
pCHi-C
Hi-C
ATAC-seq
ChIP-seq
tissue
islet of Langerhans
2
2
psoas muscle
1
2
aorta
1
1
heart left ventricle
1
1
heart right ventricle
1
1
liver
1
1
pancreas
1
1
Ammon's horn
1
adipose tissue
1
adrenal gland
1
dorsolateral prefrontal cortex
1
esophagus
1
lung
1
ovary
1
right cardiac atrium
1
sigmoid colon
1
small intestine
1
spleen
1
thymus
1
See all biosamples
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