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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
ChIP-seq
38
ATAC-seq
5
DNase-seq
4
total RNA-seq
1
WGBS
Assay category
54
DNA binding
43
DNA accessibility
4
Transcription
1
DNA methylation
Target of assay
54
histone
54
histone modification
36
broad histone mark
18
narrow histone mark
RNA binding protein
3
transcription factor
Date released
36
May, 2019
35
February, 2023
21
October, 2019
6
July, 2019
3
June, 2019
1
March, 2020
Available data
97
bed narrowPeak
67
bam
67
bigWig
59
bigBed narrowPeak
5
bed bed3+
5
bed broadPeak
5
bigBed broadPeak
4
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
102
Homo sapiens
Biosample type
102
tissue
64
cell line
17
primary cell
Organ
475
connective tissue
417
adipose tissue
378
pancreas
236
liver
203
brain
181
heart
165
kidney
102
blood vessel
102
vasculature
96
limb
66
bone element
61
artery
42
musculature of body
31
nerve
18
ureter
16
spleen
8
skeleton
3
eye
1
pituitary gland
Project
102
AMP
Genome assembly (visualization)
102
GRCh38
67
hg19
Lab
102
AMP-T2D consortium
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
102 results
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ChIP-seq
ATAC-seq
DNase-seq
total RNA-seq
WGBS
tissue
coronary artery
2
36
2
tibial artery
18
1
2
ascending aorta
12
1
1
thoracic aorta
11
1
2
aorta
11
1
1
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