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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
29
ChIP-seq
2
pCHi-C
1
ATAC-seq
1
total RNA-seq
Assay category
29
DNA binding
1
DNA accessibility
1
Transcription
Target of assay
27
transcription factor
2
chromatin remodeller
2
histone
2
histone modification
2
narrow histone mark
Date released
84
February, 2021
27
December, 2017
2
March, 2020
2
October, 2019
1
February, 2020
June, 2019
1
November, 2019
Available data
84
txt
30
bam
30
bed narrowPeak
29
bigWig
27
bigBed narrowPeak
27
fastq
3
tsv
Organism
117
Homo sapiens
Biosample type
117
tissue
115
in vitro differentiated cells
93
cell line
29
primary cell
1
stem cell
Organ
84
bone element
27
liver
3
brain
1
adipose tissue
1
connective tissue
1
stomach
1
urinary bladder
Project
117
AMP
Genome assembly (visualization)
30
GRCh38
30
hg19
Lab
117
AMP-T2D consortium
Audit category:
90
inconsistent ontology term
27
inconsistent control
9
audit script error
month_released!
June, 2019
BIOSAMPLE
ASSAY
117 results
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RNA microarray
ChIP-seq
pCHi-C
ATAC-seq
total RNA-seq
tissue
bone element
84
liver
27
adipose tissue(adipose white tissue)
1
bladder (urinary bladder)
1
brodmann area 43
1
cerebellum (Hemisphere)
1
gastric (mucosa of stomach)
1
insular gyrus
1
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