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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1351
ChIP-seq
1150
total RNA-seq
289
ATAC-seq
180
DNase-seq
174
single cell RNA-seq
87
RNA microarray
31
pCHi-C
28
WGBS
28
snATAC-seq
20
Hi-C
16
small RNA-seq
11
RRBS
10
MeRIP-seq
5
STARR-seq
4
FAIRE-seq
3
CRISPR genome editing followed by DNA sequencing
3
snDrop-seq
2
Capture-C
2
HiChIP
1
CRISPR genome editing followed by sgRNA sequencing
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
16
Transcription
Date released
16
July, 2019
Available data
16
bam
16
bigWig
16
tsv
Organism
16
Homo sapiens
Biosample type
16
tissue
2
primary cell
0
cell line
Organ
4
brain
3
liver
2
adipose tissue
2
connective tissue
2
pancreas
1
heart
1
kidney
1
musculature of body
Project
16
AMP
Genome assembly (visualization)
16
GRCh38
16
hg19
Lab
16
AMP-T2D consortium
BIOSAMPLE
ASSAY
16 results
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small RNA-seq
tissue
body of pancreas
2
right lobe of liver
2
cerebellum (Hemisphere)
1
diencephalon
1
frontal cortex
1
heart
1
liver
1
metanephros
1
occipital lobe
1
omental fat pad
1
parietal lobe
1
skeletal muscle tissue
1
subcutaneous adipose tissue
1
temporal lobe
1
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