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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
167
total RNA-seq
145
ChIP-seq
20
ATAC-seq
3
WGBS
2
DNase-seq
1
Hi-C
1
RRBS
1
pCHi-C
1
single cell RNA-seq
1
small RNA-seq
Assay category
145
DNA binding
Target of assay
65
histone modification
64
histone
43
control
42
narrow histone mark
37
transcription factor
22
broad histone mark
2
chromatin remodeller
1
RNA binding protein
Date released
50
May, 2020
48
August, 2017
38
December, 2017
5
October, 2019
4
November, 2018
Available data
122
bam
82
bed narrowPeak
82
bigWig
70
tagAlign
67
fastq
38
bigBed narrowPeak
3
bed bed3+
Organism
145
Homo sapiens
Biosample type
145
tissue
0
in vitro differentiated cells
Organ
145
liver
Project
145
AMP
Genome assembly (visualization)
83
hg19
75
GRCh38
Lab
145
AMP-T2D consortium
Audit category:
27
inconsistent control
Audit category:
1
inconsistent control read length
BIOSAMPLE
ASSAY
145 results
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ChIP-seq
tissue
liver
145
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