Experiment Matrix

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BIOSAMPLE

	ASSAY
2020 results Clear Filters	total RNA-seq	ATAC-seq	single cell RNA-seq	DNase-seq	RNA microarray	snATAC-seq	WGBS	small RNA-seq	Hi-C	RRBS	pCHi-C	FAIRE-seq	GRO-seq	MeRIP-seq	snDrop-seq	Capture-C
tissue
adipose tissue	382	3					3
islet of Langerhans	290	66	6	1		7			3	1	4	1		4
kidney	49	75	64	13		6			1	1		1
liver	166	20	1	2			3	1		1
bone element					84
bone tissue	58
coronary artery	1	36		2
heart left ventricle	2	2	18	3			4			1
heart	4		1	18			1	1	1
retina	3	15		3
heart right ventricle			17	1			2
left cardiac atrium			18	1
lung			9			10
right cardiac atrium			18				1
brain	1	1		14						1
muscle of arm				17
body of pancreas	3	4		4			2	2
muscle of leg				13			1
pigmented layer of retina	2	12
pancreas	1			2		4	2			1		1
renal cortex interstitium				11
renal pelvis				10
right kidney				10
subcutaneous adipose tissue	7	1			1			1
left kidney				9
omental fat pad	5	1		2				1
right lobe of liver	3	1		2			1	2
skeletal muscle tissue	1	1	1			1		1		4
tibial nerve	5	1		2
aorta			4				2
frontal cortex	2			2				1				1
right atrium auricular region	3	1		2
gastrocnemius medialis	1								4
aortic valve			4
cerebellum (Hemisphere)	1	1		1				1
left renal cortex interstitium				4
left renal pelvis				4
pulmonary valve			4
right renal pelvis				4
spleen		1		1			2
tibial artery	1	1		2
tricuspid valve			4
ascending aorta	2			1
cardiac atrium	1		2
cardiac ventricle	1		2
mitral valve			3
occipital lobe	1			1				1
right renal cortex interstitium				3
subcutaneous abdominal adipose tissue							3
thoracic aorta	2	1
visceral abdominal adipose tissue	3
Ammon's horn	1			1
acetabular part of hip bone	1	1
caudate nucleus	1			1
cerebellum	2
diencephalon	1							1
ilium	1	1
interventricular septum			2
ischium	1	1
metanephros	1							1
parietal lobe	1							1
pubis	1	1
pulmonary artery			2
putamen	1			1
temporal lobe	1							1
C1 segment of cervical spinal cord	1
adipose tissue(adipose white tissue)		1
amygdala	1
anterior cingulate cortex	1
cerebellar cortex				1
distal epiphysis		1
distal epiphysis of femur		1
distal epiphysis of humerus		1
distal epiphysis of tibia		1
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))	1
forelimb muscle				1
globus pallidus				1
hindlimb muscle				1
hypothalamus	1
inferior parietal cortex				1
kidney (Cortex-Medulla)															1
kidney (cortex)															1
kidney (medulla)															1
kidney interstitium					1
left ventricle myocardium	1
medulla oblongata				1
midbrain				1
middle frontal gyrus				1
nucleus accumbens	1
pericardium										1
pons				1
posterior cingulate cortex		1
proximal epiphysis		1
proximal epiphysis of femur		1
proximal epiphysis of humerus		1
proximal epiphysis of tibia		1
renal glomerulus					1
substantia nigra	1
superior temporal gyrus				1
thymus											1
in vitro differentiated cells
cardiomyocytes	59
cardiac precursors (cardiac muscle cell)	19	1							1
neural progenitor cell	7	10
adipocyte	5	8		1												1
embryonic stem cell	7	6
induced pluripotent stem cell	9
cardiomyocytes (cardiac muscle cell)	2	1	2						1
Pancreatic progenitors (progenitor cell of endocrine pancreas)		5
chondrocyte		5
pancreatic endoderm	4												1
immature adipocyte	2	2
definitive endodermal cell	2												1
primitive gut cell	2												1
endocrine cell	2
osteoblast		1														1
posterior foregut	2
preadipocyte	1	1
Posterior foregut													1
Progenitor cell of Hypothalamus (neural progenitor cell)		1
cardiac fibroblast	1
endothelial cell	1
hematopoietic multipotent progenitor cell	1
intermediate cardiomyocytes	1
intermediate endothelial cell	1
intermediate smooth muscle cell	1
islet precursor cell	1
mesodermal cell (lineage marker-negative)	1
mesodermal cell (pacemaker intermediate)	1
neuron cell of Hypothalamus (neuron)		1
smooth muscle cell	1
stem cell	1
white fat cell											1

Experiment Matrix

Assay

Assay category

Target of assay

Date released

Available data

Organism

Biosample type

Organ

Project

Genome assembly (visualization)

Lab

Audit category:

month_released!

assay_slims!

2020 results