Experiment Matrix

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BIOSAMPLE

	ASSAY
3487 results Clear Filters	total RNA-seq	ChIP-seq	ATAC-seq	single cell RNA-seq	DNase-seq	RNA microarray	snATAC-seq	WGBS	pCHi-C	Hi-C	RRBS	small RNA-seq	FAIRE-seq	MeRIP-seq	snDrop-seq	DNAme array
tissue
islet of Langerhans	298	62	68		1		7		4	3	1		1	4
adipose tissue	382	2	3					3	1
liver	167	75	20	1	2			3	1	1	1	1
kidney	49	27	75	64	13		6			1	1		1
bone element						84
heart left ventricle	3	35	2	18	3			4	1	1	1
bone tissue	58
body of pancreas	3	35	4		4			2				2
coronary artery	1	5	36		2
tibial nerve	5	35	1		2
heart	4	14		1	18			1		1		1
heart right ventricle	1	13		17	1			2	1	1
subcutaneous abdominal adipose tissue		28						3
tibial artery	1	23	1		2
right cardiac atrium		6		18				1	1
spleen		20	1		1			2	1
brain	1	6	1		14						1
pancreas	2	9			2		4	2	1	1	1		1
aorta	1	13		4				2	1	1
subcutaneous adipose tissue	7	12	1			1						1
muscle of leg		7			13			1
retina	3		15		3
lung				9			10		1
omental fat pad	5	11	1		2							1
ascending aorta	2	16			1
left cardiac atrium				18	1
right lobe of liver	3	10	1		2			1				2
thoracic aorta	2	16	1
muscle of arm					17
temporal lobe	1	15										1
endocrine pancreas		16
right atrium auricular region	3	10	1		2
skeletal muscle tissue	1	7	1	1			1				4	1
pigmented layer of retina	2		12
angular gyrus		13
germinal matrix		12
white adipose tissue		12
renal cortex interstitium					11
renal pelvis					10
right kidney					10
left kidney					9
layer of hippocampus		8
cerebellum (Hemisphere)	1	2	1		1							1
frontal cortex	2				2							1	1
middle frontal area 46		6
gastrocnemius medialis	1									4
psoas muscle	2								1	2
aortic valve				4
left renal cortex interstitium					4
left renal pelvis					4
pulmonary valve				4
right renal pelvis					4
tricuspid valve				4
Ammon's horn	1				1				1
cardiac atrium	1			2
cardiac ventricle	1			2
mitral valve				3
occipital lobe	1				1							1
right renal cortex interstitium					3
superior frontal gyrus		3
visceral abdominal adipose tissue	3
acetabular part of hip bone	1		1
amygdala	1	1
anterior cingulate gyrus		2
caudate nucleus	1				1
cerebellum	2
diencephalon	1											1
ilium	1		1
interventricular septum				2
ischium	1		1
metanephros	1											1
middle frontal gyrus		1			1
middle temporal gyrus		2
nucleus accumbens	1	1
parietal lobe	1											1
pons		1			1
precuneus cortex		2
pubis	1		1
pulmonary artery				2
putamen	1				1
thymus									2
C1 segment of cervical spinal cord	1
adipose tissue(adipose white tissue)			1
adrenal gland									1
anterior cingulate cortex	1
bed nucleus of stria terminalis		1
bladder (urinary bladder)									1
brodmann area 43		1
central medial thalamic nucleus		1
cerebellar cortex					1
claustrum of brain		1
distal epiphysis			1
distal epiphysis of femur			1
distal epiphysis of humerus			1
distal epiphysis of tibia			1
dorsal lateral geniculate nucleus		1
dorsal plus ventral thalamus		1
dorsolateral prefrontal cortex									1
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))	1
esophagus									1
fastigial nucleus		1
forelimb muscle					1
frontal pole		1
gastric (mucosa of stomach)									1
globus pallidus					1
head of caudate nucleus		1
hindlimb muscle					1
hippocampal gyrus		1
hypothalamus	1
inferior parietal cortex					1
insular gyrus		1
kidney (Cortex-Medulla)															1
kidney (cortex)															1
kidney (medulla)															1
kidney interstitium						1
lateral hypothalamic area		1
lateral occipital gyrus		1
left ventricle myocardium	1
mammillary body		1
medial dorsal nucleus of thalamus		1
medial geniculate nucleus		1
medulla oblongata					1
midbrain					1
midbrain tectum		1
olivary body		1
orbital gyrus		1
ovary									1
paraterminal gyrus		1
pericardium											1
piriform cortex		1
planum polare		1
planum temporale		1
posterior cingulate cortex			1
posterior cingulate gyrus		1
primary somatosensory cortex		1
proximal epiphysis			1
proximal epiphysis of femur			1
proximal epiphysis of humerus			1
proximal epiphysis of tibia			1
pulvinar nucleus		1
renal glomerulus						1
sigmoid colon									1
small intestine									1
subiculum		1
substantia nigra	1
substantia nigra pars reticulata		1
subthalamic nucleus		1
superior parietal cortex		1
superior temporal gyrus					1
suprachiasmatic nucleus		1
supramarginal gyrus		1
temporal pole		1
transverse temporal gyrus		1
uncus of parahippocampal gyrus		1
primary cell
pancreatic alpha cell	52	13	35	12				31		1
Langerhans cell				85			48
pancreatic beta cell	21	13	23	12				16		1
monocyte	54	1	15						1							1
CD8-positive, alpha-beta T cell	4	33	2						1
exocrine cell	39
pancreatic acinar cell	4	8	9	12						1
pancreatic ductal cell	4	13	4	10
naive thymus-derived CD4-positive, alpha-beta T cell	1	2	22						1
pancreatic endocrine cell		23
CD4-positive, alpha-beta memory T cell			22
endothelial cell of umbilical vein		17			2					2			1
epithelial cell of proximal tubule	1	10			1						1
macrophage			11						1
pancreatic delta cell				11
skeletal muscle satellite cell	1	8										1
cardiac fibroblast		5			3						1
osteoblast	5		2		1				1
pancreatic cell				9
pancreatic polypeptide-secreting cell				9
kidney epithelial cell	1	5			1						1
peripheral blood mononuclear cell							8
hepatocyte	5				1						1
mesenchymal stem cell		7
skeletal muscle myoblast	1	3			2						1
mesenchymal cell				6
B cell	2		2						1
astrocyte of the cerebellum		3			1					1
brain microvascular endothelial cell		3			1					1
cardiac muscle cell		3			1						1
choroid plexus epithelial cell		3			1						1
naive B cel	2		2						1
naive thymus-derived CD8-positive, alpha-beta T cell	2		2						1
retinal pigment epithelial cell		3			1						1
T follicular helper cell	2		2
T-helper 1 cell	2		2
T-helper 17 cell	2		2
T-helper 2 cell	2		2
central memory CD8-positive, alpha-beta T cell	2		2
effector CD4-positive, alpha-beta T cell	2		2
effector T cell	2		2
effector memory CD8-positive, alpha-beta T cell	2		2
gamma-delta T cell	2		2
kidney tubule cell	1				3
mature natural killer cell	2		2
memory B cell	2		2
memory T cell	2		2
memory regulatory T cell	2		2
naive regulatory T cell	2		2
pancreatic stellate cell				4
regulatory T cell	2		2
skeletal muscle cell		2			1						1
gabaergic neuron			3
glutamatergic neuron			3
kidney glomerular epithelial cell	1				2
microglial cell/astrocyte			3
neutrophil	1	1							1
oligodendrocyte			3
renal cortical epithelial cell	1				1						1
CD4-positive, alpha-beta T cell									2
brain pericyte					1					1
cerebellar granule cell				2
co-expressing pancreatic endocrine cell				2
endothelial cell				2
enteroendocrine cell				2
glomerular endothelial cell	1				1
glomerular visceral epithelial cell					2
immature natural killer cell	1		1
mast cell				2
mesenchymal stem cell of adipose	1											1
myeloid dendritic cell	1		1
natural killer cell	1		1
pancreatic epsilon cell				2
plasma cell	1		1
plasmacytoid dendritic cell	1		1
unclassified exocrine cell				2
unclassified pancreatic endocrine cell				2
Heart fetal (cardiac muscle cell)			1
Liver fetal (hepatocyte)			1
Purkinje cell				1
activated CD4-positive, alpha-beta T cell									1
adult endothelial progenitor cell									1
alternatively activated macrophage									1
astrocyte of the hippocampus					1
cardiac atrium fibroblast	1
cardiac ventricle fibroblast	1
chondrocytes										1
embryonic stem cell	1
endothelial cell of coronary artery	1
endothelial cell of hepatic sinusoid										1
erythroblast									1
hepatic stellate cell					1
inflammatory macrophage									1
kidney capillary endothelial cell					1
megakaryocyte									1
mesangial cell	1
pericardium fibroblast	1
smooth muscle cell of the brain vasculature					1
smooth muscle cell of the coronary artery	1

Experiment Matrix

Assay

Assay category

Target of assay

Date released

Available data

Organism

Biosample type

Organ

Project

Genome assembly (visualization)

Lab

Audit category:

Audit category:

Audit category:

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3487 results