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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
37
ATAC-seq
28
ChIP-seq
2
single cell RNA-seq
2
total RNA-seq
Assay category
37
DNA accessibility
28
DNA binding
4
Transcription
Target of assay
20
histone
20
histone modification
14
broad histone mark
7
control
6
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
35
February, 2023
24
October, 2019
5
May, 2019
2
August, 2021
2
February, 2020
1
July, 2019
Available data
62
bed narrowPeak
34
bam
27
bigWig
25
bigBed narrowPeak
4
bed bed3+
4
bed broadPeak
bigBed broadPeak
4
tsv
Organism
69
Homo sapiens
Biosample type
69
tissue
66
cell line
2
primary cell
Organ
545
connective tissue
499
pancreas
486
adipose tissue
358
liver
286
heart
238
brain
231
kidney
158
bone element
128
blood vessel
128
vasculature
86
limb
69
artery
53
eye
50
musculature of body
41
nerve
24
spleen
lung
16
skeleton
15
epithelium
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
esophagus
1
large intestine
1
lymph node
1
pericardium
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
69
AMP
Genome assembly (visualization)
58
GRCh38
23
hg19
Lab
69
AMP-T2D consortium
files.file_type!
bigBed broadPeak
organ_slims!
lung
BIOSAMPLE
ASSAY
69 results
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ATAC-seq
ChIP-seq
single cell RNA-seq
total RNA-seq
tissue
coronary artery
36
5
1
tibial artery
1
23
1
pulmonary artery
2
See all biosamples
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