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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
73
ChIP-seq
5
DNase-seq
4
total RNA-seq
3
ATAC-seq
2
WGBS
Assay category
73
DNA binding
8
DNA accessibility
4
Transcription
2
DNA methylation
Target of assay
54
histone
54
histone modification
36
broad histone mark
18
narrow histone mark
16
control
3
RNA binding protein
3
transcription factor
Date released
50
May, 2019
26
October, 2019
7
July, 2019
3
June, 2019
1
March, 2020
Available data
100
bed narrowPeak
87
bam
70
bigWig
62
bigBed narrowPeak
14
tsv
5
bed bed3+
5
bed broadPeak
5
bigBed broadPeak
1
bed bedMethyl
1
bedpe bed3+
1
bigBed bedMethyl
1
hic
Organism
87
Homo sapiens
Biosample type
87
tissue
66
cell line
27
primary cell
Organ
498
connective tissue
440
adipose tissue
429
pancreas
288
liver
226
brain
132
heart
114
limb
98
kidney
87
blood vessel
87
vasculature
66
bone element
44
musculature of body
42
nerve
34
artery
24
spleen
18
ureter
8
skeleton
3
eye
1
pituitary gland
Project
87
AMP
Genome assembly (visualization)
70
GRCh38
69
hg19
Lab
87
AMP-T2D consortium
BIOSAMPLE
ASSAY
87 results
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ChIP-seq
DNase-seq
total RNA-seq
ATAC-seq
WGBS
tissue
tibial artery
23
2
1
thoracic aorta
16
2
1
ascending aorta
16
1
1
aorta
13
1
2
coronary artery
5
2
1
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