Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ChIP-seq
1
snATAC-seq
Assay category
28
DNA binding
1
DNA accessibility
Target of assay
13
transcription factor
12
histone
12
histone modification
6
broad histone mark
6
narrow histone mark
3
control
2
RNA binding protein
Date released
26
August, 2017
2
September, 2017
1
May, 2022
Available data
1793
bam
1681
bigWig
1069
tsv
892
bed narrowPeak
477
bigBed narrowPeak
377
fastq
238
tagAlign
177
bed broadPeak
169
bed bed3+
157
txt
bigBed broadPeak
64
xls
24
bed bedMethyl
24
bigBed bedMethyl
11
hic
10
bedpe bed3+
6
csv
5
bed bed3
1
bedpe
1
tagAlign bed3+
Organism
29
Homo sapiens
Biosample type
29
tissue
25
in vitro differentiated cells
10
primary cell
3
stem cell
2
cell line
Organ
21
pancreas
4
adipose tissue
4
connective tissue
3
liver
1
musculature of body
Project
29
AMP
Genome assembly (visualization)
29
hg19
28
GRCh38
Lab
29
AMP-T2D consortium
Audit category:
1
audit script error
Audit category:
14
missing controlled_by
organ_slims!
limb
files.file_type!
bigBed broadPeak
BIOSAMPLE
ASSAY
29 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
snATAC-seq
tissue
islet of Langerhans
21
white adipose tissue
4
liver
3
skeletal muscle tissue
1
See all biosamples
Download