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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ChIP-seq
Assay category
28
DNA binding
Target of assay
79
transcription factor
74
histone modification
73
histone
67
control
45
broad histone mark
28
narrow histone mark
15
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
Date released
18
August, 2017
5
October, 2018
2
December, 2017
2
January, 2019
1
October, 2017
Available data
268
bigWig
266
bed narrowPeak
243
bam
110
tagAlign
108
bigBed narrowPeak
28
fastq
15
bed broadPeak
6
bed bed3+
1
tagAlign bed3+
Organism
26
Homo sapiens
Biosample type
42
primary cell
33
in vitro differentiated cells
28
tissue
8
cell line
1
stem cell
Organ
17
pancreas
7
liver
2
spleen
1
adipose tissue
1
brain
1
connective tissue
Project
28
AMP
Genome assembly (visualization)
28
GRCh38
28
hg19
Lab
28
AMP-T2D consortium
Audit category:
4
missing controlled_by
Audit category:
3
inconsistent control read length
BIOSAMPLE
ASSAY
28 results
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ChIP-seq
tissue
islet of Langerhans
8
body of pancreas
5
liver
5
pancreas
4
right lobe of liver
2
spleen
2
adipose tissue
1
brain
1
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