Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
Hi-C
Assay category
15
3D chromatin structure
Date released
9
March, 2020
3
October, 2019
1
August, 2021
1
March, 2019
1
November, 2019
Available data
2198
bam
1991
bigWig
1207
tsv
1076
bed narrowPeak
578
bigBed narrowPeak
518
fastq
278
tagAlign
230
bed bed3+
214
bed broadPeak
177
bigBed broadPeak
160
txt
64
xls
25
bed bedMethyl
25
bigBed bedMethyl
17
bedpe bed3+
15
hic
10
bed bed3
7
bed bedgraph
6
csv
2
ibed
1
bedpe
1
tagAlign bed3+
Organism
15
Homo sapiens
Biosample type
11
tissue
6
primary cell
4
in vitro differentiated cells
2
cell line
Organ
3
heart
3
pancreas
2
musculature of body
1
blood vessel
1
kidney
1
liver
1
vasculature
Project
15
AMP
Genome assembly (visualization)
15
hg19
Lab
13
AMP-T2D consortium
1
Bing Ren, UCSD
1
Katalin Susztak, Upenn
Audit category:
4
inconsistent ontology term
BIOSAMPLE
ASSAY
15 results
search-icon
table-tab-icon
Clear Filters
Hi-C
tissue
islet of Langerhans
2
psoas muscle
2
aorta
1
heart
1
heart left ventricle
1
heart right ventricle
1
kidney
1
liver
1
pancreas
1
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
cardiac precursors (cardiac muscle cell)
1
lymphocyte of B lineage (iPSC)
1
See all biosamples
Download