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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
122
ChIP-seq
Assay category
122
DNA binding
Target of assay
70
histone
70
histone modification
52
control
36
broad histone mark
34
narrow histone mark
Date released
53
August, 2017
31
May, 2020
21
November, 2017
9
October, 2019
8
October, 2017
Available data
204
bam
159
tsv
157
txt
122
tagAlign
101
bed narrowPeak
97
fastq
60
bigWig
22
bed broadPeak
11
hic
10
bedpe bed3+
9
bed bedMethyl
9
bigBed bedMethyl
6
bigBed narrowPeak
6
csv
5
bed bed3
1
bed bed3+
1
bedpe
Organism
121
Homo sapiens
Biosample type
122
tissue
22
in vitro differentiated cells
6
cell line
2
primary cell
Organ
51
liver
36
brain
15
musculature of body
10
pancreas
8
adipose tissue
8
connective tissue
Project
122
AMP
Genome assembly (visualization)
GRCh38
105
hg19
Lab
122
AMP-T2D consortium
Audit category:
1
missing controlled_by
assembly!
GRCh38
BIOSAMPLE
ASSAY
122 results
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ChIP-seq
tissue
liver
51
skeletal muscle tissue
15
islet of Langerhans
9
brain
8
cingulate gyrus
8
subcutaneous abdominal adipose tissue
8
layer of hippocampus
4
substantia nigra
4
caudate nucleus
3
middle frontal area 46
2
central medial thalamic nucleus
1
cerebellum (Hemisphere)
1
gyrus rectus
1
medial globus pallidus
1
occipital pole
1
pancreas
1
primary motor cortex
1
putamen
1
secondary auditory cortex
1
white matter
1
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