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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
907
ChIP-seq
593
total RNA-seq
252
ATAC-seq
178
DNase-seq
168
single cell RNA-seq
28
snATAC-seq
27
WGBS
24
pCHi-C
16
Hi-C
16
small RNA-seq
11
RRBS
4
FAIRE-seq
4
MeRIP-seq
3
RNA microarray
Assay category
16
3D chromatin structure
Date released
7
March, 2020
4
July, 2019
2
August, 2021
1
March, 2019
1
November, 2019
1
October, 2019
Available data
11
hic
10
bedpe bed3+
1
bedpe
Organism
16
Homo sapiens
Biosample type
16
tissue
10
primary cell
4
cell line
4
in vitro differentiated cells
Organ
6
musculature of body
4
limb
4
pancreas
3
heart
1
blood vessel
1
kidney
1
liver
1
vasculature
Project
16
AMP
Genome assembly (visualization)
11
hg19
Lab
13
AMP-T2D consortium
2
Bing Ren, UCSD
1
Katalin Susztak, Upenn
month_released!
February, 2021
organ_slims!
small intestine
BIOSAMPLE
ASSAY
16 results
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Hi-C
tissue
gastrocnemius medialis
4
islet of Langerhans
3
psoas muscle
2
aorta
1
heart
1
heart left ventricle
1
heart right ventricle
1
kidney
1
liver
1
pancreas
1
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