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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
102
ATAC-seq
42
ChIP-seq
Assay category
102
DNA accessibility
42
DNA binding
Target of assay
37
histone
37
histone modification
20
broad histone mark
17
narrow histone mark
5
RNA binding protein
5
transcription factor
Date released
64
August, 2021
40
May, 2024
35
February, 2023
May, 2023
2
March, 2019
2
October, 2019
1
October, 2017
Available data
1712
bigWig
bam
917
tsv
883
bed narrowPeak
555
bigBed narrowPeak
280
fastq
204
bed bed3+
191
bed broadPeak
176
bigBed broadPeak
116
tagAlign
64
xls
16
bed bedMethyl
16
bigBed bedMethyl
1
tagAlign bed3+
Organism
144
Homo sapiens
Biosample type
144
tissue
11
primary cell
1
cell line
Organ
75
heart
64
kidney
35
artery
35
blood vessel
35
vasculature
3
pancreas
2
brain
Project
144
AMP
Genome assembly (visualization)
144
GRCh38
106
hg19
Lab
64
Katalin Susztak, Upenn
40
Patrick T. Ellinor, Broad
37
AMP-T2D consortium
1
Bing Ren, UCSD
1
Mark McCarthy, Oxford
1
Stephen Parker, UMich
month_released!
May, 2023
files.file_type!
bam
BIOSAMPLE
ASSAY
144 results
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ATAC-seq
ChIP-seq
tissue
kidney
64
left cardiac atrium
40
coronary artery
35
islet of Langerhans
3
dorsal plus ventral thalamus
1
planum polare
1
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