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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
153
ChIP-seq
89
total RNA-seq
9
WGBS
5
RRBS
2
ATAC-seq
2
DNase-seq
1
FAIRE-seq
Assay category
153
DNA binding
89
Transcription
14
DNA methylation
5
DNA accessibility
Target of assay
124
histone modification
123
histone
73
broad histone mark
50
narrow histone mark
29
control
transcription factor
2
RNA binding protein
Date released
545
February, 2021
261
August, 2017
242
October, 2019
229
August, 2021
193
May, 2020
163
June, 2019
120
July, 2018
111
May, 2019
95
February, 2023
82
November, 2017
77
July, 2019
74
April, 2019
66
May, 2022
59
October, 2018
47
September, 2023
40
March, 2020
40
May, 2021
40
November, 2019
25
February, 2020
23
October, 2017
19
April, 2020
19
November, 2018
17
December, 2017
15
May, 2023
8
January, 2021
7
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
4
December, 2018
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
Available data
155
bigWig
152
fastq
147
bam
89
tsv
61
bed narrowPeak
59
tagAlign
26
bed broadPeak
22
bigBed narrowPeak
13
bed bed3+
5
bed bedMethyl
5
bigBed bedMethyl
Organism
254
Homo sapiens
Biosample type
261
tissue
57
primary cell
46
in vitro differentiated cells
Organ
140
pancreas
50
liver
45
adipose tissue
45
connective tissue
26
musculature of body
Project
261
AMP
Genome assembly (visualization)
157
hg19
135
GRCh38
Lab
261
AMP-T2D consortium
Audit category:
4
missing controlled_by
Audit category:
5
inconsistent control read length
1
inconsistent assembly
target.investigated_as!
transcription factor
BIOSAMPLE
ASSAY
261 results
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Clear Filters
ChIP-seq
total RNA-seq
WGBS
RRBS
ATAC-seq
DNase-seq
FAIRE-seq
tissue
islet of Langerhans
35
89
1
1
liver
44
3
1
subcutaneous abdominal adipose tissue
36
3
skeletal muscle tissue
22
4
pancreas
14
adipose tissue
2
3
right lobe of liver
1
1
subcutaneous adipose tissue
1
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