Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
70
total RNA-seq
16
small RNA-seq
12
WGBS
6
ATAC-seq
6
RRBS
4
Hi-C
2
FAIRE-seq
1
pCHi-C
Assay category
86
Transcription
18
DNA methylation
8
DNA accessibility
4
3D chromatin structure
Date released
545
February, 2021
284
August, 2017
242
October, 2019
229
August, 2021
193
May, 2020
163
June, 2019
120
July, 2018
115
May, 2019
95
February, 2023
82
November, 2017
80
April, 2019
77
July, 2019
74
October, 2018
66
May, 2022
48
December, 2017
47
September, 2023
40
March, 2020
40
May, 2021
40
November, 2019
26
November, 2018
25
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
Available data
102
bam
101
bigWig
85
tsv
14
bed bedMethyl
14
bigBed bedMethyl
7
bed narrowPeak
2
bigBed narrowPeak
Organism
117
Homo sapiens
Biosample type
237
primary cell
132
in vitro differentiated cells
117
tissue
21
cell line
Organ
43
pancreas
22
heart
11
brain
10
adipose tissue
10
connective tissue
8
liver
7
blood vessel
7
musculature of body
7
vasculature
5
limb
4
kidney
1
artery
1
pericardium
1
thymus
Project
116
AMP
1
T1D
Genome assembly (visualization)
99
GRCh38
98
hg19
Lab
115
AMP-T2D consortium
2
Kyle Gaulton, UCSD
BIOSAMPLE
ASSAY
117 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
small RNA-seq
WGBS
ATAC-seq
RRBS
Hi-C
FAIRE-seq
pCHi-C
tissue
islet of Langerhans
36
1
heart left ventricle
2
4
2
1
omental fat pad
4
1
right lobe of liver
2
2
1
subcutaneous adipose tissue
4
1
body of pancreas
2
2
gastrocnemius medialis
4
heart
2
1
1
frontal cortex
1
1
1
liver
2
1
right atrium auricular region
2
1
thoracic aorta
2
1
aorta
2
diencephalon
1
1
heart right ventricle
2
kidney
1
1
metanephros
1
1
occipital lobe
1
1
pancreas
1
1
parietal lobe
1
1
skeletal muscle tissue
1
1
temporal lobe
1
1
ascending aorta
1
brain
1
cardiac atrium
1
cardiac ventricle
1
cerebellum
1
cerebellum (Hemisphere)
1
coronary artery
1
muscle of leg
1
pericardium
1
posterior cingulate cortex
1
right cardiac atrium
1
thymus
1
See all biosamples
Download