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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
43
total RNA-seq
16
ATAC-seq
1
ChIP-seq
1
pCHi-C
Assay category
43
Transcription
16
DNA accessibility
1
DNA binding
Target of assay
1
histone
1
histone modification
1
narrow histone mark
Date released
641
February, 2021
397
November, 2017
284
August, 2017
273
August, 2021
272
October, 2019
194
May, 2020
163
June, 2019
120
July, 2018
115
May, 2019
101
February, 2023
87
November, 2018
80
April, 2019
77
July, 2019
74
October, 2018
66
May, 2022
61
May, 2021
56
November, 2019
51
March, 2020
48
December, 2017
47
September, 2023
40
May, 2024
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
10
November, 2020
8
January, 2021
6
April, 2018
6
September, 2017
5
March, 2019
3
December, 2019
3
January, 2018
2
March, 2023
1
August, 2022
1
October, 2022
Available data
43
bam
43
bigWig
42
tsv
1
bed narrowPeak
Organism
61
Homo sapiens
Biosample type
206
primary cell
132
in vitro differentiated cells
40
tissue
21
cell line
Organ
58
pancreas
21
epithelium
2
heart
1
thymus
Project
59
AMP
2
T1D
Genome assembly (visualization)
43
GRCh38
43
hg19
Lab
59
AMP-T2D consortium
2
Kyle Gaulton, UCSD
Audit category:
21
inconsistent ontology term
BIOSAMPLE
ASSAY
61 results
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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
pCHi-C
tissue
islet of Langerhans
36
cardiac atrium
1
cardiac ventricle
1
pancreas
1
thymus
1
cell line
EndoC_BH1
4
16
1
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