Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
48
ChIP-seq
11
ATAC-seq
3
single cell RNA-seq
total RNA-seq
Assay category
48
DNA binding
11
DNA accessibility
3
Transcription
Target of assay
31
transcription factor
12
control
5
histone
5
histone modification
3
broad histone mark
2
RNA binding protein
2
chromatin remodeller
2
narrow histone mark
Date released
220
October, 2019
195
August, 2017
179
August, 2021
163
June, 2019
115
May, 2019
101
February, 2021
82
February, 2023
82
November, 2017
80
April, 2019
74
October, 2018
50
May, 2020
48
December, 2017
47
September, 2023
46
July, 2019
40
May, 2022
40
May, 2024
31
March, 2020
26
November, 2018
23
October, 2017
21
November, 2019
19
April, 2020
14
May, 2023
8
January, 2021
7
December, 2018
7
January, 2019
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
1
May, 2021
Available data
48
bam
48
fastq
36
bed narrowPeak
36
bigBed narrowPeak
36
bigWig
Organism
62
Homo sapiens
Biosample type
62
tissue
43
in vitro differentiated cells
3
stem cell
Organ
48
liver
14
kidney
Project
62
AMP
Genome assembly (visualization)
47
GRCh38
36
hg19
Lab
48
AMP-T2D consortium
14
Katalin Susztak, Upenn
Audit category:
27
inconsistent control
assay_title!
total RNA-seq
BIOSAMPLE
ASSAY
62 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
ATAC-seq
single cell RNA-seq
tissue
liver
38
kidney
11
3
right lobe of liver
10
See all biosamples
Download