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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
48
ChIP-seq
13
ATAC-seq
3
single cell RNA-seq
1
total RNA-seq
Assay category
48
DNA binding
13
DNA accessibility
4
Transcription
Target of assay
31
transcription factor
12
control
5
histone
5
histone modification
3
broad histone mark
2
RNA binding protein
2
chromatin remodeller
2
narrow histone mark
Date released
545
February, 2021
284
August, 2017
242
October, 2019
229
August, 2021
193
May, 2020
163
June, 2019
120
July, 2018
115
May, 2019
95
February, 2023
82
November, 2017
80
April, 2019
77
July, 2019
74
October, 2018
66
May, 2022
48
December, 2017
47
September, 2023
40
March, 2020
40
May, 2021
40
May, 2024
40
November, 2019
26
November, 2018
25
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
Available data
48
bam
48
fastq
38
bigWig
36
bed narrowPeak
36
bigBed narrowPeak
Organism
65
Homo sapiens
Biosample type
65
tissue
47
in vitro differentiated cells
4
stem cell
1
cell line
Organ
48
liver
14
kidney
2
adipose tissue
2
connective tissue
1
musculature of body
Project
65
AMP
Genome assembly (visualization)
48
GRCh38
39
hg19
Lab
51
AMP-T2D consortium
14
Katalin Susztak, Upenn
Audit category:
27
inconsistent control
BIOSAMPLE
ASSAY
65 results
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Clear Filters
ChIP-seq
ATAC-seq
single cell RNA-seq
total RNA-seq
tissue
liver
38
kidney
11
3
right lobe of liver
10
adipose tissue
1
1
skeletal muscle tissue
1
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