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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
82
ChIP-seq
64
total RNA-seq
1
pCHi-C
Assay category
82
DNA binding
64
Transcription
Target of assay
70
histone
70
histone modification
42
broad histone mark
28
narrow histone mark
12
control
Date released
545
February, 2021
284
August, 2017
242
October, 2019
229
August, 2021
193
May, 2020
163
June, 2019
120
July, 2018
115
May, 2019
95
February, 2023
82
November, 2017
80
April, 2019
77
July, 2019
74
October, 2018
66
May, 2022
48
December, 2017
47
September, 2023
40
March, 2020
40
May, 2021
40
May, 2024
40
November, 2019
26
November, 2018
25
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
Available data
107
bam
95
bigWig
66
tagAlign
63
tsv
58
bed narrowPeak
57
bigBed narrowPeak
6
bed broadPeak
Organism
147
Homo sapiens
Biosample type
336
cell line
215
primary cell
147
tissue
132
in vitro differentiated cells
Organ
94
brain
38
pancreas
5
heart
3
blood vessel
3
limb
3
vasculature
2
adipose tissue
2
artery
2
connective tissue
2
musculature of body
1
eye
1
liver
1
nerve
1
spinal cord
1
thymus
Project
146
AMP
1
T1D
Genome assembly (visualization)
95
GRCh38
44
hg19
Lab
145
AMP-T2D consortium
2
Kyle Gaulton, UCSD
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
147 results
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Clear Filters
ChIP-seq
total RNA-seq
pCHi-C
tissue
islet of Langerhans
36
layer of hippocampus
22
caudate nucleus
15
1
substantia nigra
15
1
cingulate gyrus
14
middle frontal area 46
14
cerebellum (Hemisphere)
2
1
Ammon's horn
1
C1 segment of cervical spinal cord
1
amygdala
1
anterior cingulate cortex
1
ascending aorta
1
body of pancreas
1
cardiac atrium
1
cardiac ventricle
1
cerebellum
1
coronary artery
1
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
1
frontal cortex
1
gastrocnemius medialis
1
hypothalamus
1
left ventricle myocardium
1
nucleus accumbens
1
omental fat pad
1
pancreas
1
putamen
1
retina
1
right atrium auricular region
1
right lobe of liver
1
subcutaneous adipose tissue
1
thymus
1
tibial artery
1
tibial nerve
1
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