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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
46
ATAC-seq
26
total RNA-seq
15
ChIP-seq
1
single cell RNA-seq
1
snATAC-seq
Assay category
47
DNA accessibility
27
Transcription
15
DNA binding
Target of assay
12
histone
12
histone modification
10
broad histone mark
3
control
2
narrow histone mark
Date released
545
February, 2021
284
August, 2017
242
October, 2019
229
August, 2021
193
May, 2020
163
June, 2019
120
July, 2018
115
May, 2019
95
February, 2023
82
November, 2017
80
April, 2019
77
July, 2019
74
October, 2018
66
May, 2022
48
December, 2017
47
September, 2023
40
March, 2020
40
May, 2021
40
November, 2019
26
November, 2018
25
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
Available data
50
bed narrowPeak
41
fastq
39
bam
34
bigWig
14
tagAlign
7
txt
6
bigBed narrowPeak
4
bed broadPeak
1
bed bed3+
Organism
89
Homo sapiens
Biosample type
134
primary cell
89
tissue
Organ
40
liver
29
pancreas
16
brain
2
musculature of body
1
adipose tissue
1
connective tissue
1
spleen
Project
89
AMP
Genome assembly (visualization)
52
hg19
14
GRCh38
Lab
40
Karen Mohlke, UNC
24
AMP-T2D consortium
24
Kyle Gaulton, UCSD
1
Stephen Parker, UMich
Audit category:
1
audit script error
Audit category:
4
missing controlled_by
BIOSAMPLE
ASSAY
89 results
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Clear Filters
ATAC-seq
total RNA-seq
ChIP-seq
single cell RNA-seq
snATAC-seq
tissue
liver
20
20
islet of Langerhans
19
6
brain
15
body of pancreas
4
skeletal muscle tissue
1
1
cerebellum (Hemisphere)
1
omental fat pad
1
spleen
1
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