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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
89
ChIP-seq
8
ATAC-seq
Assay category
89
DNA binding
8
DNA accessibility
Target of assay
42
histone
42
histone modification
32
control
29
broad histone mark
15
transcription factor
13
narrow histone mark
11
RNA binding protein
Date released
545
February, 2021
284
August, 2017
242
October, 2019
229
August, 2021
193
May, 2020
163
June, 2019
120
July, 2018
115
May, 2019
95
February, 2023
82
November, 2017
80
April, 2019
77
July, 2019
74
October, 2018
66
May, 2022
48
December, 2017
47
September, 2023
40
March, 2020
40
May, 2021
40
November, 2019
26
November, 2018
25
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
Available data
89
bam
75
fastq
59
bigWig
57
bed narrowPeak
51
bigBed narrowPeak
14
tagAlign
4
bed broadPeak
Organism
97
Homo sapiens
Biosample type
97
tissue
2
primary cell
Organ
56
pancreas
24
adipose tissue
24
connective tissue
16
brain
1
spleen
Project
97
AMP
Genome assembly (visualization)
59
GRCh38
58
hg19
Lab
96
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
4
missing controlled_by
Audit category:
1
inconsistent control read length
BIOSAMPLE
ASSAY
97 results
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Clear Filters
ChIP-seq
ATAC-seq
tissue
body of pancreas
33
4
endocrine pancreas
16
brain
15
omental fat pad
11
1
subcutaneous adipose tissue
12
pancreas
2
cerebellum (Hemisphere)
1
islet of Langerhans
1
spleen
1
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