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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
23
total RNA-seq
14
small RNA-seq
12
WGBS
6
ATAC-seq
6
RRBS
4
Hi-C
2
FAIRE-seq
Assay category
37
Transcription
18
DNA methylation
8
DNA accessibility
4
3D chromatin structure
Date released
241
October, 2019
228
August, 2021
227
August, 2017
193
May, 2020
162
June, 2019
159
February, 2021
120
July, 2018
115
May, 2019
94
February, 2023
82
November, 2017
80
April, 2019
67
July, 2019
66
May, 2022
51
October, 2018
48
December, 2017
47
September, 2023
40
May, 2021
39
March, 2020
39
November, 2019
25
November, 2018
23
February, 2020
22
October, 2017
19
April, 2020
14
May, 2023
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
1
August, 2022
1
January, 2018
Available data
54
bam
53
bigWig
37
tsv
14
bed bedMethyl
14
bigBed bedMethyl
7
bed narrowPeak
2
bigBed narrowPeak
Organism
67
Homo sapiens
Biosample type
67
tissue
29
primary cell
Organ
20
heart
11
brain
adipose tissue
10
connective tissue
8
liver
7
blood vessel
7
musculature of body
7
vasculature
6
pancreas
5
limb
4
kidney
1
artery
1
pericardium
Project
67
AMP
Genome assembly (visualization)
51
GRCh38
50
hg19
Lab
67
AMP-T2D consortium
organ_slims!
adipose tissue
BIOSAMPLE
ASSAY
67 results
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Clear Filters
total RNA-seq
small RNA-seq
WGBS
ATAC-seq
RRBS
Hi-C
FAIRE-seq
tissue
heart left ventricle
2
4
2
1
right lobe of liver
2
2
1
body of pancreas
2
2
gastrocnemius medialis
4
heart
2
1
1
frontal cortex
1
1
1
liver
2
1
right atrium auricular region
2
1
thoracic aorta
2
1
aorta
2
diencephalon
1
1
heart right ventricle
2
kidney
1
1
metanephros
1
1
occipital lobe
1
1
parietal lobe
1
1
skeletal muscle tissue
1
1
temporal lobe
1
1
ascending aorta
1
brain
1
cerebellum
1
cerebellum (Hemisphere)
1
coronary artery
1
islet of Langerhans
1
muscle of leg
1
pancreas
1
pericardium
1
posterior cingulate cortex
1
right cardiac atrium
1
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