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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
925
total RNA-seq
880
ChIP-seq
173
ATAC-seq
110
DNase-seq
110
single cell RNA-seq
27
WGBS
25
pCHi-C
22
snATAC-seq
15
Hi-C
15
small RNA-seq
10
RRBS
4
MeRIP-seq
3
FAIRE-seq
1
RNA microarray
Date released
20
March, 2020
4
October, 2019
1
May, 2021
Available data
20
tsv
Organism
25
Homo sapiens
Biosample type
25
tissue
16
primary cell
5
in vitro differentiated cells
4
cell line
4
stem cell
Organ
4
eye
3
heart
2
brain
2
intestine
2
thymus
1
adipose tissue
1
adrenal gland
1
blood vessel
1
connective tissue
1
esophagus
1
gonad
1
large intestine
1
liver
1
lung
1
musculature of body
1
ovary
1
pancreas
1
small intestine
1
spleen
1
stomach
1
urinary bladder
1
vasculature
Project
24
AMP
1
T1D
Lab
24
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Audit category:
2
inconsistent ontology term
organ_slims!
bone element
kidney
BIOSAMPLE
ASSAY
25 results
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pCHi-C
tissue
islet of Langerhans
4
thymus
2
Ammon's horn
1
adipose tissue
1
adrenal gland
1
aorta
1
bladder (urinary bladder)
1
dorsolateral prefrontal cortex
1
esophagus
1
gastric (mucosa of stomach)
1
heart left ventricle
1
heart right ventricle
1
liver
1
lung
1
ovary
1
pancreas
1
psoas muscle
1
right cardiac atrium
1
sigmoid colon
1
small intestine
1
spleen
1
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