Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
73
ChIP-seq
38
ATAC-seq
6
single cell RNA-seq
6
total RNA-seq
5
DNase-seq
2
WGBS
Assay category
73
DNA binding
43
DNA accessibility
12
Transcription
2
DNA methylation
Target of assay
54
histone
54
histone modification
36
broad histone mark
18
narrow histone mark
16
control
3
RNA binding protein
3
transcription factor
Date released
50
May, 2019
35
February, 2023
26
October, 2019
7
July, 2019
6
August, 2021
3
February, 2020
3
June, 2019
March, 2020
Available data
100
bed narrowPeak
86
bam
69
bigWig
62
bigBed narrowPeak
12
tsv
5
bed bed3+
5
bed broadPeak
5
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
130
Homo sapiens
Biosample type
130
tissue
66
cell line
29
primary cell
Organ
546
connective tissue
496
pancreas
487
adipose tissue
liver
306
heart
299
kidney
263
brain
158
bone element
130
blood vessel
130
vasculature
122
limb
77
musculature of body
73
artery
56
eye
43
nerve
24
spleen
19
lung
18
ureter
16
skeleton
15
epithelium
4
gonad
4
ovary
2
pituitary gland
1
lymph node
1
pericardium
1
skin of body
1
spinal cord
1
thymus
Project
130
AMP
Genome assembly (visualization)
104
GRCh38
68
hg19
Lab
130
AMP-T2D consortium
organ_slims!
liver
month_released!
March, 2020
BIOSAMPLE
ASSAY
130 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
ATAC-seq
single cell RNA-seq
total RNA-seq
DNase-seq
WGBS
tissue
coronary artery
5
36
1
2
tibial artery
23
1
1
2
aorta
13
4
2
ascending aorta
16
2
1
thoracic aorta
16
1
2
pulmonary artery
2
See all biosamples
Download