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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
ChIP-seq
5
DNase-seq
4
total RNA-seq
3
ATAC-seq
1
WGBS
Assay category
54
DNA binding
8
DNA accessibility
4
Transcription
1
DNA methylation
Target of assay
54
histone
54
histone modification
36
broad histone mark
18
narrow histone mark
RNA binding protein
3
transcription factor
Date released
36
May, 2019
21
October, 2019
6
July, 2019
3
June, 2019
1
March, 2020
Available data
97
bed narrowPeak
84
bam
67
bigWig
59
bigBed narrowPeak
14
tsv
5
bed bed3+
5
bed broadPeak
5
bigBed broadPeak
1
bed bedMethyl
1
bedpe bed3+
1
bigBed bedMethyl
1
hic
Organism
67
Homo sapiens
Biosample type
67
tissue
56
cell line
27
primary cell
Organ
476
connective tissue
418
adipose tissue
365
pancreas
263
liver
202
brain
147
heart
91
kidney
91
limb
67
blood vessel
67
vasculature
58
bone element
57
musculature of body
31
nerve
26
artery
18
ureter
16
spleen
3
eye
1
pituitary gland
Project
67
AMP
Genome assembly (visualization)
67
GRCh38
66
hg19
Lab
67
AMP-T2D consortium
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
67 results
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ChIP-seq
DNase-seq
total RNA-seq
ATAC-seq
WGBS
tissue
tibial artery
18
2
1
ascending aorta
12
1
1
thoracic aorta
11
2
1
aorta
11
1
1
coronary artery
2
2
1
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