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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
147
ATAC-seq
22
ChIP-seq
Assay category
147
DNA accessibility
22
DNA binding
Target of assay
22
histone
22
histone modification
12
broad histone mark
10
narrow histone mark
Date released
64
August, 2021
63
February, 2023
20
August, 2017
20
May, 2022
1
April, 2019
1
November, 2017
Available data
bam
1732
bigWig
1076
tsv
944
bed narrowPeak
561
bigBed narrowPeak
377
fastq
238
tagAlign
213
bed broadPeak
205
bed bed3+
176
bigBed broadPeak
157
txt
64
xls
25
bed bedMethyl
25
bigBed bedMethyl
11
hic
10
bedpe bed3+
6
csv
5
bed bed3
1
bedpe
1
tagAlign bed3+
Organism
169
Homo sapiens
Biosample type
169
tissue
30
primary cell
14
cell line
4
in vitro differentiated cells
Organ
64
kidney
36
heart
35
artery
35
blood vessel
35
vasculature
27
eye
20
liver
13
musculature of body
12
epithelium
6
pancreas
2
adipose tissue
2
connective tissue
1
brain
Project
169
AMP
Genome assembly (visualization)
99
GRCh38
70
hg19
Lab
85
AMP-T2D consortium
64
Katalin Susztak, Upenn
20
Karen Mohlke, UNC
files.file_type!
bam
BIOSAMPLE
ASSAY
169 results
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ATAC-seq
ChIP-seq
tissue
kidney
64
coronary artery
35
liver
20
retina
15
skeletal muscle tissue
13
pigmented layer of retina
12
islet of Langerhans
6
adipose tissue
1
cingulate gyrus
1
heart left ventricle
1
subcutaneous abdominal adipose tissue
1
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