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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
ATAC-seq
Assay category
10
DNA accessibility
Date released
9
February, 2021
1
November, 2019
Available data
582
bam
bigWig
427
fastq
404
bed narrowPeak
355
bigBed narrowPeak
119
tsv
59
bed broadPeak
59
bigBed broadPeak
20
tagAlign
3
bed bed3+
3
tar
2
bedpe bed3+
2
hic
1
bed bed3
1
bed bedMethyl
1
bigBed bedMethyl
1
hdf5
1
txt
1
vcf
Organism
10
Homo sapiens
Biosample type
174
tissue
17
in vitro differentiated cells
16
primary cell
10
cell line
Organ
8
artery
8
blood vessel
8
heart
8
vasculature
1
epithelium
1
liver
1
pancreas
Project
10
AMP
Genome assembly (visualization)
10
GRCh38
10
hg19
Lab
10
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
1
inconsistent replicate
files.file_type!
bigWig
BIOSAMPLE
ASSAY
10 results
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ATAC-seq
cell line
smooth muscle cell of the coronary artery
8
EndoC_BH1
1
HepG2
1
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