Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
Hi-C
2
total RNA-seq
Assay category
4
3D chromatin structure
2
Transcription
Date released
4
July, 2019
2
May, 2021
Available data
613
bigWig
bam
409
fastq
295
bed narrowPeak
270
tsv
153
zippedFastqFolder
109
bigBed narrowPeak
100
tagAlign
49
bed broadPeak
49
bigBed broadPeak
37
bed bed3+
10
bed bedMethyl
10
bigBed bedMethyl
hic
4
bedpe bed3+
4
hdf5
3
cool
2
csv
1
bed bed3
1
tar
Organism
6
Homo sapiens
Biosample type
6
in vitro differentiated cells
6
primary cell
2
cell line
1
tissue
Organ
3
brain
2
blood vessel
2
epithelium
2
vasculature
1
connective tissue
1
liver
Project
6
AMP
Genome assembly (visualization)
6
hg19
Lab
4
AMP-T2D consortium
2
Kyle Gaulton, UCSD
files.file_type!
hic
bam
BIOSAMPLE
ASSAY
6 results
search-icon
table-tab-icon
Clear Filters
Hi-C
total RNA-seq
primary cell
CD8-positive, alpha-beta T cell
2
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
endothelial cell of hepatic sinusoid
1
See all biosamples
Download