Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
240
ATAC-seq
216
ChIP-seq
176
single cell RNA-seq
148
total RNA-seq
87
RNA microarray
40
pCHi-C
28
snATAC-seq
24
Hi-C
11
RRBS
10
MeRIP-seq
10
WGBS
5
GRO-seq
5
STARR-seq
4
Capture-C
3
CRISPR genome editing followed by DNA sequencing
3
snDrop-seq
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNase-seq
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
10
DNA methylation
Date released
7
August, 2017
3
July, 2019
Available data
bam
17
bed bedMethyl
17
bigBed bedMethyl
17
bigWig
11
fastq
Organism
10
Homo sapiens
Biosample type
primary cell
10
tissue
Organ
4
adipose tissue
4
connective tissue
4
liver
2
heart
Project
10
AMP
Lab
10
AMP-T2D consortium
files.file_type!
bam
biosample_type!
primary cell
BIOSAMPLE
ASSAY
10 results
search-icon
table-tab-icon
Clear Filters
WGBS
tissue
liver
3
subcutaneous abdominal adipose tissue
3
heart left ventricle
2
adipose tissue
1
right lobe of liver
1
Download