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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
79
ATAC-seq
55
total RNA-seq
47
WGBS
8
Hi-C
6
MeRIP-seq
6
RRBS
2
Capture-C
2
DNase-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
RNA microarray
0
pCHi-C
Assay category
55
Transcription
Date released
39
February, 2023
16
September, 2020
Available data
81
fastq
78
tsv
bam
76
bigWig
Organism
55
Homo sapiens
Biosample type
53
primary cell
2
tissue
Organ
68
pancreas
55
epithelium
51
kidney
33
liver
23
eye
14
brain
11
connective tissue
6
heart
5
adipose tissue
5
bone element
4
blood vessel
4
skeleton
4
vasculature
3
limb
3
musculature of body
2
artery
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
nerve
1
ovary
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
urinary bladder
Project
53
HPAP
2
AMP
Lab
53
Klaus Kaestner, Upenn
2
AMP-T2D consortium
files.file_type!
bam
BIOSAMPLE
ASSAY
55 results
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total RNA-seq
primary cell
pancreatic alpha cell
42
pancreatic beta cell
11
tissue
pigmented layer of retina
2
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