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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
74
ChIP-seq
21
ATAC-seq
9
total RNA-seq
1
DNAme array
Assay category
74
DNA binding
21
DNA accessibility
9
Transcription
1
DNA methylation
Target of assay
54
histone
54
histone modification
32
broad histone mark
22
narrow histone mark
12
transcription factor
8
control
5
RNA binding protein
Date released
265
August, 2021
129
August, 2017
106
February, 2023
105
May, 2021
98
February, 2021
64
October, 2019
58
May, 2020
46
March, 2020
42
May, 2022
40
May, 2024
26
July, 2019
25
February, 2020
15
May, 2023
14
November, 2017
10
November, 2020
8
January, 2018
8
October, 2017
5
December, 2019
4
July, 2018
4
March, 2019
2
November, 2019
1
April, 2019
1
August, 2018
1
August, 2022
1
December, 2018
1
November, 2018
1
October, 2022
1
September, 2018
Available data
167
bigWig
bam
122
tsv
48
bed narrowPeak
6
tagAlign
2
bed bed3+
Organism
105
Homo sapiens
Biosample type
47
in vitro differentiated cells
41
primary cell
16
cell line
1
tissue
Organ
17
pancreas
16
epithelium
Project
105
AMP
17
T1D
Genome assembly (visualization)
40
hg19
Lab
83
Kyle Gaulton, UCSD
22
AMP-T2D consortium
Audit category:
16
inconsistent ontology term
files.file_type!
bam
assay_title!
STARR-seq
BIOSAMPLE
ASSAY
105 results
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Clear Filters
ChIP-seq
ATAC-seq
total RNA-seq
DNAme array
in vitro differentiated cells
embryonic stem cell
37
5
5
primary cell
CD8-positive, alpha-beta T cell
33
2
monocyte
1
1
1
naive thymus-derived CD4-positive, alpha-beta T cell
2
neutrophil
1
cell line
EndoC_BH1
16
tissue
pancreas
1
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