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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
75
ATAC-seq
64
single cell RNA-seq
49
total RNA-seq
6
snATAC-seq
1
Hi-C
1
RRBS
Assay category
113
Transcription
81
DNA accessibility
1
3D chromatin structure
1
DNA methylation
Date released
128
August, 2021
47
September, 2023
14
May, 2023
5
February, 2021
1
December, 2019
1
July, 2019
Available data
98
bed narrowPeak
64
xls
62
txt
bam
34
bigWig
32
bigBed narrowPeak
13
bed bed3+
13
bed broadPeak
13
bigBed broadPeak
5
csv
5
tsv
1
bed bedMethyl
1
bigBed bedMethyl
1
hic
Organism
196
Homo sapiens
Biosample type
196
tissue
Organ
196
kidney
Project
149
AMP
47
KPMP
Genome assembly (visualization)
75
GRCh38
2
hg19
Lab
142
Katalin Susztak, Upenn
47
KPMP
7
AMP-T2D consortium
Audit category:
5
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files.file_type!
bam
BIOSAMPLE
ASSAY
196 results
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ATAC-seq
single cell RNA-seq
total RNA-seq
snATAC-seq
Hi-C
RRBS
tissue
kidney
75
64
49
6
1
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