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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
37
ChIP-seq
21
ATAC-seq
6
total RNA-seq
1
pCHi-C
Assay category
37
DNA binding
21
DNA accessibility
6
Transcription
Target of assay
20
histone
20
histone modification
12
transcription factor
10
broad histone mark
10
narrow histone mark
5
RNA binding protein
5
control
Date released
270
August, 2021
128
August, 2017
117
February, 2023
98
February, 2021
65
May, 2021
61
October, 2019
47
March, 2020
47
September, 2023
42
May, 2022
25
February, 2020
19
April, 2020
15
May, 2023
14
November, 2017
13
July, 2019
10
November, 2020
8
January, 2018
8
January, 2021
8
October, 2017
5
December, 2019
4
July, 2018
4
March, 2019
4
March, 2023
2
November, 2019
1
April, 2019
1
August, 2018
1
August, 2022
1
December, 2018
1
May, 2020
1
October, 2022
Available data
132
bigWig
bam
121
tsv
6
bed narrowPeak
6
tagAlign
Organism
65
Homo sapiens
Biosample type
primary cell
47
in vitro differentiated cells
16
cell line
2
tissue
Organ
17
pancreas
16
epithelium
1
thymus
Project
64
AMP
1
T1D
Genome assembly (visualization)
5
hg19
Lab
49
Kyle Gaulton, UCSD
16
AMP-T2D consortium
Audit category:
16
inconsistent ontology term
files.file_type!
bam
biosample_type!
primary cell
BIOSAMPLE
ASSAY
65 results
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Clear Filters
ChIP-seq
ATAC-seq
total RNA-seq
pCHi-C
in vitro differentiated cells
embryonic stem cell
37
5
5
cell line
EndoC_BH1
16
tissue
pancreas
1
thymus
1
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