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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
ChIP-seq
4
pCHi-C
2
Hi-C
Assay category
14
DNA binding
2
3D chromatin structure
Target of assay
12
histone
12
histone modification
8
broad histone mark
4
narrow histone mark
2
control
Date released
47
May, 2021
16
February, 2023
14
August, 2017
6
March, 2020
5
August, 2021
4
February, 2021
4
January, 2018
4
October, 2019
2
December, 2019
1
August, 2018
Available data
bam
54
fastq
50
bigWig
43
bed narrowPeak
14
tagAlign
7
bed bed3+
4
bedpe bed3+
4
tsv
2
hic
2
ibed
1
bed broadPeak
1
bigBed broadPeak
1
bigBed narrowPeak
Organism
20
Homo sapiens
Biosample type
145
tissue
20
in vitro differentiated cells
6
cell line
4
stem cell
2
primary cell
Organ
14
connective tissue
Project
20
AMP
Genome assembly (visualization)
4
hg19
Lab
20
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
files.file_type!
bam
BIOSAMPLE
ASSAY
20 results
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Clear Filters
ChIP-seq
pCHi-C
Hi-C
in vitro differentiated cells
adipocyte
14
cardiomyocytes (cardiac muscle cell)
2
1
lymphocyte of B lineage (iPSC)
1
1
embryonic stem cell
1
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