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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
RRBS
2
WGBS
1
ATAC-seq
1
ChIP-seq
Assay category
5
DNA methylation
1
DNA accessibility
1
DNA binding
Target of assay
1
broad histone mark
1
histone
1
histone modification
Date released
5
August, 2017
2
October, 2017
Available data
bam
1732
bigWig
1076
tsv
944
bed narrowPeak
561
bigBed narrowPeak
377
fastq
238
tagAlign
213
bed broadPeak
205
bed bed3+
176
bigBed broadPeak
157
txt
64
xls
25
bed bedMethyl
25
bigBed bedMethyl
11
hic
10
bedpe bed3+
6
csv
5
bed bed3
1
bedpe
1
tagAlign bed3+
Organism
7
Homo sapiens
Biosample type
172
primary cell
7
tissue
5
in vitro differentiated cells
2
cell line
1
stem cell
Organ
2
liver
2
musculature of body
1
adipose tissue
1
brain
1
connective tissue
1
pancreas
Project
7
AMP
Genome assembly (visualization)
4
hg19
1
GRCh38
Lab
6
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
1
missing controlled_by
files.file_type!
bam
BIOSAMPLE
ASSAY
7 results
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RRBS
WGBS
ATAC-seq
ChIP-seq
tissue
liver
1
1
skeletal muscle tissue
2
adipose tissue
1
brain
1
islet of Langerhans
1
See all biosamples
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