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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
27
snATAC-seq
12
single cell RNA-seq
6
WGBS
4
ATAC-seq
3
snDrop-seq
1
pCHi-C
Assay category
31
DNA accessibility
12
Transcription
6
DNA methylation
Date released
270
August, 2021
205
February, 2023
176
May, 2022
137
February, 2021
125
August, 2017
122
May, 2021
64
October, 2019
59
September, 2020
58
May, 2020
48
March, 2020
47
September, 2023
40
May, 2024
25
February, 2020
19
April, 2020
16
January, 2021
15
May, 2023
14
November, 2017
11
July, 2019
10
November, 2020
8
January, 2018
8
October, 2017
7
August, 2020
5
December, 2019
5
March, 2023
4
July, 2018
4
March, 2019
4
October, 2022
2
November, 2019
1
April, 2019
1
August, 2018
1
August, 2022
1
December, 2018
Available data
bam
559
tsv
551
bigWig
89
txt
45
fastq
23
bed narrowPeak
8
tagAlign
csv
4
bed bedgraph
2
bed bed3
2
bed bed3+
Organism
137
Homo sapiens
Biosample type
87
tissue
45
primary cell
4
in vitro differentiated cells
1
cell line
Organ
84
bone element
6
epithelium
6
pancreas
4
connective tissue
3
kidney
1
liver
Project
92
AMP
45
HPAP
Genome assembly (visualization)
5
hg19
Lab
92
AMP-T2D consortium
45
Klaus Kaestner, Upenn
Audit category:
84
inconsistent ontology term
27
audit script error
files.file_type!
bam
bed bedMethyl
csv
BIOSAMPLE
ASSAY
137 results
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Clear Filters
RNA microarray
snATAC-seq
single cell RNA-seq
WGBS
ATAC-seq
snDrop-seq
pCHi-C
tissue
bone element
84
kidney (Cortex-Medulla)
1
kidney (cortex)
1
kidney (medulla)
1
primary cell
Langerhans cell
27
12
pancreatic alpha cell
6
in vitro differentiated cells
adipocyte
4
cell line
HepG2
1
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