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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
snATAC-seq
18
single cell RNA-seq
6
WGBS
4
ATAC-seq
3
snDrop-seq
1
pCHi-C
Assay category
31
DNA accessibility
18
Transcription
6
DNA methylation
Date released
270
August, 2021
197
February, 2023
176
May, 2022
125
August, 2017
121
May, 2021
64
October, 2019
59
February, 2021
59
September, 2020
58
May, 2020
48
March, 2020
47
September, 2023
40
May, 2024
25
February, 2020
19
April, 2020
16
January, 2021
15
May, 2023
14
November, 2017
11
July, 2019
10
November, 2020
8
January, 2018
8
October, 2017
7
August, 2020
5
December, 2019
5
March, 2023
4
July, 2018
4
March, 2019
4
October, 2022
2
November, 2019
1
April, 2019
1
August, 2018
1
August, 2022
1
December, 2018
1
November, 2018
1
September, 2018
Available data
bam
501
tsv
493
bigWig
45
fastq
15
bed narrowPeak
8
tagAlign
6
csv
5
txt
4
bed bedgraph
2
bed bed3
2
bed bed3+
Organism
59
Homo sapiens
Biosample type
45
primary cell
9
tissue
4
in vitro differentiated cells
1
cell line
Organ
bone element
8
kidney
6
epithelium
6
pancreas
4
connective tissue
2
liver
Project
45
HPAP
14
AMP
Genome assembly (visualization)
5
hg19
Lab
45
Klaus Kaestner, Upenn
14
AMP-T2D consortium
Audit category:
32
audit script error
files.file_type!
bam
bed bedMethyl
organ_slims!
bone element
BIOSAMPLE
ASSAY
59 results
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Clear Filters
snATAC-seq
single cell RNA-seq
WGBS
ATAC-seq
snDrop-seq
pCHi-C
primary cell
Langerhans cell
27
12
pancreatic alpha cell
6
tissue
kidney
5
kidney (Cortex-Medulla)
1
kidney (cortex)
1
kidney (medulla)
1
liver
1
in vitro differentiated cells
adipocyte
4
cell line
HepG2
1
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